Other packages > Find by keyword >

DDRTree  

Learning Principal Graphs with DDRTree
View on CRAN: Click here


Download and install DDRTree package within the R console
Install from CRAN:
install.packages("DDRTree")

Install from Github:
library("remotes")
install_github("cran/DDRTree")

Install by package version:
library("remotes")
install_version("DDRTree", "0.1.5")



Attach the package and use:
library("DDRTree")
Maintained by
Xiaojie Qiu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-02-02
Latest Update: 2017-04-30
Description:
Provides an implementation of the framework of reversed graph embedding (RGE) which projects data into a reduced dimensional space while constructs a principal tree which passes through the middle of the data simultaneously. DDRTree shows superiority to alternatives (Wishbone, DPT) for inferring the ordering as well as the intrinsic structure of the single cell genomics data. In general, it could be used to reconstruct the temporal progression as well as bifurcation structure of any datatype.
How to cite:
Xiaojie Qiu (2016). DDRTree: Learning Principal Graphs with DDRTree. R package version 0.1.5, https://cran.r-project.org/web/packages/DDRTree. Accessed 06 Aug. 2026.
Previous versions and publish date:
0.1.3 (2016-02-02 11:48), 0.1.4 (2016-07-26 02:03), 0.1.5 (2017-04-30 22:54), (2026-07-09 08:01)
Other packages that cited DDRTree R package
View DDRTree citation profile
Other R packages that DDRTree depends, imports, suggests or enhances
Complete documentation for DDRTree
Functions, R codes and Examples using the DDRTree R package
Some associated functions: DDRTree . get_major_eigenvalue . pca_projection_R . sqdist_R . 
Some associated R codes: DDRTree.R . RcppExports.R . help.R .  Full DDRTree package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

SAMBA  
Selection and Misclassification Bias Adjustment for Logistic Regression Models
Health research using data from electronic health records (EHR) has gained popularity, but miscla ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
TMDb  
Access to TMDb API
Provides an R-interface to the TMDb API (see TMDb API on < ...
Download / Learn more Package Citations See dependency  
lsmeans  
Least-Squares Means
Obtain least-squares means for linear, generalized linear, and mixed models. Compute contrasts or l ...
Download / Learn more Package Citations See dependency  
RRedshiftSQL  
R Interface to the 'Redshift' Database
Superclasses 'PostgreSQL' connection to help enable full 'dplyr' functionality on 'Redshift'. ...
Download / Learn more Package Citations See dependency  

28,083

R Packages

239,283

Dependencies

74,457

Author Associations

28,084

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA