Other packages > Find by keyword >

DDRTree  

Learning Principal Graphs with DDRTree
View on CRAN: Click here


Download and install DDRTree package within the R console
Install from CRAN:
install.packages("DDRTree")

Install from Github:
library("remotes")
install_github("cran/DDRTree")

Install by package version:
library("remotes")
install_version("DDRTree", "0.1.5")



Attach the package and use:
library("DDRTree")
Maintained by
Xiaojie Qiu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-02-02
Latest Update: 2017-04-30
Description:
Provides an implementation of the framework of reversed graph embedding (RGE) which projects data into a reduced dimensional space while constructs a principal tree which passes through the middle of the data simultaneously. DDRTree shows superiority to alternatives (Wishbone, DPT) for inferring the ordering as well as the intrinsic structure of the single cell genomics data. In general, it could be used to reconstruct the temporal progression as well as bifurcation structure of any datatype.
How to cite:
Xiaojie Qiu (2016). DDRTree: Learning Principal Graphs with DDRTree. R package version 0.1.5, https://cran.r-project.org/web/packages/DDRTree. Accessed 06 Jun. 2026.
Previous versions and publish date:
0.1.3 (2016-02-02 11:48), 0.1.4 (2016-07-26 02:03), 0.1.5 (2017-04-30 22:54)
Other packages that cited DDRTree R package
View DDRTree citation profile
Other R packages that DDRTree depends, imports, suggests or enhances
Complete documentation for DDRTree
Functions, R codes and Examples using the DDRTree R package
Some associated functions: DDRTree . get_major_eigenvalue . pca_projection_R . sqdist_R . 
Some associated R codes: DDRTree.R . RcppExports.R . help.R .  Full DDRTree package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

IAPWS95  
Thermophysical Properties of Water and Steam
An implementation of the International Association for the Properties of Water (IAPWS) Formulation ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
worrrd  
Generate Wordsearch and Crossword Puzzles
Generate wordsearch and crossword puzzles using custom lists of words (and clues).Make them easy or ...
Download / Learn more Package Citations See dependency  
odbc  
Connect to ODBC Compatible Databases (using the DBI Interface)
A DBI-compatible interface to ODBC databases. ...
Download / Learn more Package Citations See dependency  
rwavelet  
Wavelet Analysis
Perform wavelet analysis (orthogonal,translation invariant, tensorial, 1-2-3d transforms, thresholdi ...
Download / Learn more Package Citations See dependency  
BALLI  
Expression RNA-Seq Data Analysis Based on Linear Mixed Model
Analysis of gene expression RNA-seq data using Bartlett-Adjusted Likelihood-based LInear model (BALL ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,820

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA