R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
CpGassoc
View on CRAN: Click
here
Download and install CpGassoc package within the R console
Install from CRAN:
install.packages("CpGassoc")
Install from Github:
library("remotes")
install_github("cran/CpGassoc") Install by package version:
library("remotes")
install_version("CpGassoc", "2.70") Attach the package and use:
library("CpGassoc")
Maintained by
R Barfield
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2012-05-22
Latest Update: 2024-07-16
Description:
Is designed to test for association between methylation at CpG sites across the genome and a phenotype of interest, adjusting for any relevant covariates. The package can perform standard analyses of large datasets very quickly with no need to impute the data. It can also handle mixed effects models with chip or batch entering the model as a random intercept. Also includes tools to apply quality control filters, perform permutation tests, and create QQ plots, manhattan plots, and scatterplots for individual CpG sites.
How to cite:
R Barfield (2012). CpGassoc: Association Between Methylation and a Phenotype of Interest. R package version 2.70, https://cran.r-project.org/web/packages/CpGassoc. Accessed 12 Jun. 2026.
Previous versions and publish date:
Other packages that cited CpGassoc R package
View CpGassoc citation profile
Other R packages that CpGassoc depends,
imports, suggests or enhances
Complete documentation for CpGassoc
Functions, R codes and Examples using
the CpGassoc R package
Some associated functions: CpGassoc-package . Sample.data . cpg.GC . cpg.assoc . cpg.combine . cpg.everything . cpg . cpg.perm . cpg.permject . cpg.qc . cpg.work . design . manhattan . manhattan.reflect . other.functions . scatterplot .
Some associated R codes: CpGassoc-internal.R . cpg.GC.R . cpg.assoc.R . cpg.combine.R . cpg.everything.R . cpg.everything.character.R . cpg.everything.complex.R . cpg.everything.logical.R . cpg.everything.matrix.R . cpg.everything.numeric.R . cpg.length.R . cpg.perm.R . cpg.qc.R . cpg.work.R . cpgassocsummary.R . design.NULL.R . design.R . design.data.frame.R . manhattan.R . manhattan.reflect.R . plot.cpg.R . plot.cpg.perm.R . pointsizefunction.R . print.cpg.R . print.cpg.gc.R . print.cpg.perm.R . print.cpg.perm.gc.R . scatterplot.R . sort.cpg.R . sort.cpg.perm.R . summary.cpg.R . summary.cpg.perm.R . Full CpGassoc package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
bfp
Implements the Bayesian paradigm for fractional
polynomial models under the assumption of normally ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Daniel Sabanes Bove (view profile)
piwikproR
Run Queries against the API of 'Piwik Pro' ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Martin Stingl (view profile)
MEDITS
Set of functions working with survey data in the format of the MEDITS project ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Walter Zupa (view profile)
tablerDash
'R' interface to the 'Tabler' HTML template. See more here < ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: David Granjon (view profile)
quickcode
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
27,372
R Packages
233,548
Dependencies
72,820
Author Associations
27,205
Publication Badges
