Other packages > Find by keyword >

CpGFilter  

CpG Filtering Method Based on Intra-Class Correlation Coefficients
View on CRAN: Click here


Download and install CpGFilter package within the R console
Install from CRAN:
install.packages("CpGFilter")

Install from Github:
library("remotes")
install_github("cran/CpGFilter")

Install by package version:
library("remotes")
install_version("CpGFilter", "1.1")



Attach the package and use:
library("CpGFilter")
Maintained by
Jun Chen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-11-06
Latest Update: 2017-08-23
Description:
Filter CpGs based on Intra-class Correlation Coefficients (ICCs) when replicates are available. ICCs are calculated by fitting linear mixed effects models to all samples including the un-replicated samples. Including the large number of un-replicated samples improves ICC estimates dramatically. The method accommodates any replicate design.
How to cite:
Jun Chen (2014). CpGFilter: CpG Filtering Method Based on Intra-Class Correlation Coefficients. R package version 1.1, https://cran.r-project.org/web/packages/CpGFilter. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.0 (2014-11-06 01:21)
Other packages that cited CpGFilter R package
View CpGFilter citation profile
Other R packages that CpGFilter depends, imports, suggests or enhances
Complete documentation for CpGFilter
Functions, R codes and Examples using the CpGFilter R package
Some associated functions: CpGFilterICC . 
Some associated R codes: CpGFilterICC.R .  Full CpGFilter package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

wordspace  
Distributional Semantic Models in R
An interactive laboratory for research on distributional semantic models ('DSM', see < ...
Download / Learn more Package Citations See dependency  
composits  
Compositional, Multivariate and Univariate Time Series Outlier Ensemble
A compositional multivariate and univariate time series outlier ensemble.It uses the four R packages ...
Download / Learn more Package Citations See dependency  
elect  
Estimation of Life Expectancies Using Multi-State Models
Functions to compute state-specific and marginal life expectancies. The computation is based on a fi ...
Download / Learn more Package Citations See dependency  
tropAlgebra  
Tropical Algebraic Functions
It includes functions like tropical addition, tropical multiplication for vectors and matrices. In t ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
dmlalg  
Double Machine Learning Algorithms
Implementation of double machine learning (DML) algorithms in R, based on Emmenegger and Buehlmann ...
Download / Learn more Package Citations See dependency  

23,394

R Packages

201,798

Dependencies

63,416

Author Associations

23,395

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA