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CoordinateCleaner
View on CRAN: Click
here
Download and install CoordinateCleaner package within the R console
Install from CRAN:
install.packages("CoordinateCleaner")
Install from Github:
library("remotes")
install_github("cran/CoordinateCleaner")
Install by package version:
library("remotes")
install_version("CoordinateCleaner", "3.0.1")
Attach the package and use:
library("CoordinateCleaner")
Maintained by
Alexander Zizka
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-11-10
Latest Update: 2021-10-21
Description:
Automated flagging of common spatial and temporal
errors in biological and paleontological collection data, for the use
in conservation, ecology and paleontology. Includes automated tests to
easily flag (and exclude) records assigned to country or province
centroid, the open ocean, the headquarters of the Global Biodiversity
Information Facility, urban areas or the location of biodiversity
institutions (museums, zoos, botanical gardens, universities).
Furthermore identifies per species outlier coordinates, zero
coordinates, identical latitude/longitude and invalid coordinates.
Also implements an algorithm to identify data sets with a significant
proportion of rounded coordinates. Especially suited for large data
sets. The reference for the methodology is: Zizka et al. (2019)
.
How to cite:
Alexander Zizka (2017). CoordinateCleaner: Automated Cleaning of Occurrence Records from Biological Collections. R package version 3.0.1, https://cran.r-project.org/web/packages/CoordinateCleaner
Previous versions and publish date:
1.0-2 (2017-11-10 12:47), 1.0-6 (2018-02-27 18:01), 1.0-7 (2018-03-23 15:31), 2.0-2 (2018-10-18 17:20), 2.0-3 (2018-10-24 15:50), 2.0-7 (2019-01-22 16:50), 2.0-8 (2019-03-21 15:53), 2.0-9 (2019-04-02 09:50), 2.0-11 (2019-04-24 11:10), 2.0-15 (2020-05-11 21:00), 2.0-17 (2020-08-31 11:20), 2.0-18 (2020-10-14 11:10), 2.0-20 (2021-10-21 19:10), 3.0 (2023-10-03 19:00)
Other packages that cited CoordinateCleaner R package
View CoordinateCleaner citation profile
Other R packages that CoordinateCleaner depends,
imports, suggests or enhances
Functions, R codes and Examples using
the CoordinateCleaner R package
Some associated functions: CoordinateCleaner-package . buffland . buffsea . cc_cap . cc_cen . cc_coun . cc_dupl . cc_equ . cc_gbif . cc_inst . cc_iucn . cc_outl . cc_sea . cc_urb . cc_val . cc_zero . cd_ddmm . cd_round . cf_age . cf_equal . cf_outl . cf_range . clean_coordinates . clean_dataset . clean_fossils . countryref . institutions . pbdb_example . plot.spatialvalid . write_pyrate .
Some associated R codes: CoordinateCleaner-package.R . cc_cap.R . cc_cen.R . cc_coun.R . cc_dupl.R . cc_equ.R . cc_gbif.R . cc_inst.R . cc_iucn.R . cc_outl.R . cc_sea.R . cc_urb.R . cc_val.R . cc_zero.R . cd_ddmm.R . cd_round.R . cf_age.R . cf_equal.R . cf_outl.R . cf_range.R . clean_coordinates.R . clean_dataset.R . clean_fossils.R . internal_clean_coordinate.R . internal_clean_dataset.R . internal_write_pyrate.R . methods.spatialvalid.R . write_pyrate.R . Full CoordinateCleaner package functions and examples
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