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CooccurrenceAffinity  

Affinity in Co-Occurrence Data
View on CRAN: Click here


Download and install CooccurrenceAffinity package within the R console
Install from CRAN:
install.packages("CooccurrenceAffinity")

Install from Github:
library("remotes")
install_github("cran/CooccurrenceAffinity")

Install by package version:
library("remotes")
install_version("CooccurrenceAffinity", "2.0.0")



Attach the package and use:
library("CooccurrenceAffinity")
Maintained by
Kumar Mainali
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-05-03
Latest Update: 2025-06-27
Description:
Computes a novel metric of affinity between two entities based on their co-occurrence (using binary presence/absence data). The metric and its MLE, alpha hat, were advanced in Mainali, Slud, et al, 2021 . Various types of confidence intervals and median interval were developed in Mainali and Slud, 2022 .
How to cite:
Kumar Mainali (2023). CooccurrenceAffinity: Affinity in Co-Occurrence Data. R package version 2.0.0, https://cran.r-project.org/web/packages/CooccurrenceAffinity. Accessed 24 Oct. 2026.
Previous versions and publish date:
1.0.2 (2025-06-27 09:30), 1.0 (2023-05-03 20:45), (2026-07-09 08:00)
Other packages that cited CooccurrenceAffinity R package
View CooccurrenceAffinity citation profile
Other R packages that CooccurrenceAffinity depends, imports, suggests or enhances
Complete documentation for CooccurrenceAffinity
Functions, R codes and Examples using the CooccurrenceAffinity R package
Full CooccurrenceAffinity package functions and examples
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