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ComICS  

Computational Methods for Immune Cell-Type Subsets
View on CRAN: Click here


Download and install ComICS package within the R console
Install from CRAN:
install.packages("ComICS")

Install from Github:
library("remotes")
install_github("cran/ComICS")

Install by package version:
library("remotes")
install_version("ComICS", "1.0.4")



Attach the package and use:
library("ComICS")
Maintained by
Yael Steuerman
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-12-09
Latest Update: 2018-05-13
Description:
Provided are Computational methods for Immune Cell-type Subsets, including:(1) DCQ (Digital Cell Quantifier) to infer global dynamic changes in immune cell quantities within a complex tissue; and (2) VoCAL (Variation of Cell-type Abundance Loci) a deconvolution-based method that utilizes transcriptome data to infer the quantities of immune-cell types, and then uses these quantitative traits to uncover the underlying DNA loci.
How to cite:
Yael Steuerman (2015). ComICS: Computational Methods for Immune Cell-Type Subsets. R package version 1.0.4, https://cran.r-project.org/web/packages/ComICS
Previous versions and publish date:
1.0.0 (2015-12-09 21:44), 1.0.1 (2015-12-14 17:43), 1.0.2 (2016-01-28 20:45), 1.0.3 (2016-03-07 22:38)
Other packages that cited ComICS R package
View ComICS citation profile
Other R packages that ComICS depends, imports, suggests or enhances
Functions, R codes and Examples using the ComICS R package
Some associated functions: ComICS-internal . ComICS . commons . dcq . dcqEx . vocal . vocalEx . 
Some associated R codes: IterativeFilteration.R . deconvolution.R . helperFunc.R . vocal.R . zzz.R .  Full ComICS package functions and examples
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