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ComBatFamQC  

Comprehensive Batch Effect Diagnostics and Harmonization
View on CRAN: Click here


Download and install ComBatFamQC package within the R console
Install from CRAN:
install.packages("ComBatFamQC")

Install from Github:
library("remotes")
install_github("cran/ComBatFamQC")

Install by package version:
library("remotes")
install_version("ComBatFamQC", "1.0.4")



Attach the package and use:
library("ComBatFamQC")
Maintained by
Zheng Ren
[Scholar Profile | Author Map]
First Published: 2025-01-20
Latest Update: 2025-01-20
Description:
Provides a comprehensive framework for batch effect diagnostics, harmonization, and post-harmonization downstream analysis. Features include interactive visualization tools, robust statistical tests, and a range of harmonization techniques. Additionally, 'ComBatFamQC' enables the creation of life-span age trend plots with estimated age-adjusted centiles and facilitates the generation of covariate-corrected residuals for analytical purposes. Methods for harmonization are based on approaches described in Johnson et al., (2007) <doi:10.1093/biostatistics/kxj037>, Beer et al., (2020) <doi:10.1016/j.neuroimage.2020.117129>, Pomponio et al., (2020) <doi:10.1016/j.neuroimage.2019.116450>, and Chen et al., (2021) <doi:10.1002/hbm.25688>.
How to cite:
Zheng Ren (2025). ComBatFamQC: Comprehensive Batch Effect Diagnostics and Harmonization. R package version 1.0.4, https://cran.r-project.org/web/packages/ComBatFamQC. Accessed 17 Feb. 2025.
Previous versions and publish date:
1.0.2 (2025-01-20 17:44)
Other packages that cited ComBatFamQC R package
View ComBatFamQC citation profile
Other R packages that ComBatFamQC depends, imports, suggests or enhances
Complete documentation for ComBatFamQC
Functions, R codes and Examples using the ComBatFamQC R package
Full ComBatFamQC package functions and examples
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