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CoDaLoMic  

Compositional Models to Longitudinal Microbiome Data
View on CRAN: Click here


Download and install CoDaLoMic package within the R console
Install from CRAN:
install.packages("CoDaLoMic")

Install from Github:
library("remotes")
install_github("cran/CoDaLoMic")

Install by package version:
library("remotes")
install_version("CoDaLoMic", "0.1.0")



Attach the package and use:
library("CoDaLoMic")
Maintained by
Irene Creus Martí
[Scholar Profile | Author Map]
First Published: 2025-01-20
Latest Update: 2025-01-20
Description:
Implementation of models to analyse compositional microbiome time series taking into account the interaction between groups of bacteria. The models implemented are described in Creus-Martí et al (2018, ISBN:978-84-09-07541-6), Creus-Martí et al (2021) <doi:10.1155/2021/9951817> and Creus-Martí et al (2022) <doi:10.1155/2022/4907527>.
How to cite:
Irene Creus Martí (2025). CoDaLoMic: Compositional Models to Longitudinal Microbiome Data. R package version 0.1.0, https://cran.r-project.org/web/packages/CoDaLoMic. Accessed 03 May. 2025.
Previous versions and publish date:
No previous versions
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Complete documentation for CoDaLoMic
Functions, R codes and Examples using the CoDaLoMic R package
Full CoDaLoMic package functions and examples
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