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CloneSeeker  

Seeking and Finding Clones in Copy Number and Sequencing Data
View on CRAN: Click here


Download and install CloneSeeker package within the R console
Install from CRAN:
install.packages("CloneSeeker")

Install from Github:
library("remotes")
install_github("cran/CloneSeeker")

Install by package version:
library("remotes")
install_version("CloneSeeker", "1.0.13")



Attach the package and use:
library("CloneSeeker")
Maintained by
Kevin R. Coombes
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-04-12
Latest Update: 2025-04-08
Description:
Defines the classes and functions used to simulate and to analyze data sets describing copy number variants and, optionally, sequencing mutations in order to detect clonal subsets. See Zucker et al. (2019) .
How to cite:
Kevin R. Coombes (2019). CloneSeeker: Seeking and Finding Clones in Copy Number and Sequencing Data. R package version 1.0.13, https://cran.r-project.org/web/packages/CloneSeeker. Accessed 18 Sep. 2026.
Previous versions and publish date:
1.0.4 (2019-04-12 10:52), 1.0.7 (2019-05-06 21:10), 1.0.9 (2020-01-10 02:10), 1.0.10 (2020-04-27 20:50), 1.0.11 (2022-06-30 19:00), 1.0.13 (2025-04-08 21:00), (2026-07-09 08:00)
Other packages that cited CloneSeeker R package
View CloneSeeker citation profile
Other R packages that CloneSeeker depends, imports, suggests or enhances
Complete documentation for CloneSeeker
Functions, R codes and Examples using the CloneSeeker R package
Some associated functions: 01-simplex . 02-WeightVector . 03-Tumor . 04-simulate . 05-findClones . 
Some associated R codes: 00-generics.R . 01-cloneMaker.R . 02-simulate.R . 03-utlilities.R . 04-algorithm.R . oldNames.R .  Full CloneSeeker package functions and examples
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