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ChIPtest  

Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data
View on CRAN: Click here


Download and install ChIPtest package within the R console
Install from CRAN:
install.packages("ChIPtest")

Install from Github:
library("remotes")
install_github("cran/ChIPtest")

Install by package version:
library("remotes")
install_version("ChIPtest", "1.0")



Attach the package and use:
library("ChIPtest")
Maintained by
Vicky Qian Wu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-07-20
Latest Update: 2016-07-20
Description:
Nonparametric Tests to identify the differential enrichment region for two conditions or time-course ChIP-seq data. It includes: data preprocessing function, estimation of a small constant used in hypothesis testing, a kernel-based two sample nonparametric test, two assumption-free two sample nonparametric test.
How to cite:
Vicky Qian Wu (2016). ChIPtest: Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data. R package version 1.0, https://cran.r-project.org/web/packages/ChIPtest. Accessed 13 Apr. 2025.
Previous versions and publish date:
1.0 (2016-07-20 17:59)
Other packages that cited ChIPtest R package
View ChIPtest citation profile
Other R packages that ChIPtest depends, imports, suggests or enhances
Functions, R codes and Examples using the ChIPtest R package
Some associated functions: ChIPtest-package . NormTransformation . TS_kernel . TS_twosample . data1 . data4 . est.c . 
Some associated R codes: NormTransformation.R . TS_kernel.R . TS_twosample.R . est.c.R .  Full ChIPtest package functions and examples
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