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CellDEEP  

Cell DiffErential Expression by Pooling ('CellDEEP')
View on CRAN: Click here


Download and install CellDEEP package within the R console
Install from CRAN:
install.packages("CellDEEP")

Install from Github:
library("remotes")
install_github("cran/CellDEEP")

Install by package version:
library("remotes")
install_version("CellDEEP", "1.0.1")



Attach the package and use:
library("CellDEEP")
Maintained by
Yiyi Cheng
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-03-29
Latest Update: 2026-03-29
Description:
Pool cells together before running differentially expression (DE) analysis. Tell 'CellDEEP' how many cells you want to pool together (which shall be determined by the overall cell number of data), then run DE analysis. Cheng et al. (2026) <doi:10.64898/2026.03.09.710522>.
How to cite:
Yiyi Cheng (2026). CellDEEP: Cell DiffErential Expression by Pooling ('CellDEEP'). R package version 1.0.1, https://cran.r-project.org/web/packages/CellDEEP. Accessed 24 Oct. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited CellDEEP R package
View CellDEEP citation profile
Other R packages that CellDEEP depends, imports, suggests or enhances
Complete documentation for CellDEEP
Functions, R codes and Examples using the CellDEEP R package
Full CellDEEP package functions and examples
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