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CONCUR  

Copy Number Profile Curve-Based Association Test
View on CRAN: Click here


Download and install CONCUR package within the R console
Install from CRAN:
install.packages("CONCUR")

Install from Github:
library("remotes")
install_github("cran/CONCUR")

Install by package version:
library("remotes")
install_version("CONCUR", "1.4")



Attach the package and use:
library("CONCUR")
Maintained by
Shannon T. Holloway
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-03-25
Latest Update: 2022-06-07
Description:
Implements a kernel-based association test for copy number variation (CNV) aggregate analysis in a certain genomic region (e.g., gene set, chromosome, or genome) that is robust to the within-locus and across-locus etiological heterogeneity, and bypass the need to define a "locus" unit for CNVs. Brucker, A., et al. (2020) .
How to cite:
Shannon T. Holloway (2020). CONCUR: Copy Number Profile Curve-Based Association Test. R package version 1.4, https://cran.r-project.org/web/packages/CONCUR. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.2 (2020-03-25 16:40), 1.3 (2020-08-06 16:22)
Other packages that cited CONCUR R package
View CONCUR citation profile
Other R packages that CONCUR depends, imports, suggests or enhances
Complete documentation for CONCUR
Functions, R codes and Examples using the CONCUR R package
Some associated functions: cnvData . concur . covData . phenoData . 
Some associated R codes: CAUCkernel.R . cnvData.R . commonAUC.R . compFunc.R . concur.R . createDF.R . dataChecks.R . deldup.R . popFunc.R . pv_func.R . segLength.R . test.bt.R . test.qt.R . uniqueCombinations.R .  Full CONCUR package functions and examples
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