Other packages > Find by keyword >

CNVRG  

Dirichlet Multinomial Modeling of Relative Abundance Data
View on CRAN: Click here


Download and install CNVRG package within the R console
Install from CRAN:
install.packages("CNVRG")

Install from Github:
library("remotes")
install_github("cran/CNVRG")

Install by package version:
library("remotes")
install_version("CNVRG", "1.0.0")



Attach the package and use:
library("CNVRG")
Maintained by
Joshua Harrison
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-09-16
Latest Update: 2021-09-04
Description:
Implements Dirichlet multinomial modeling of relative abundance data using functionality provided by the 'Stan' software. The purpose of this package is to provide a user friendly way to interface with 'Stan' that is suitable for those new to modeling. For more regarding the modeling mathematics and computational techniques we use see our publication in Molecular Ecology Resources titled 'Dirichlet multinomial modeling outperforms alternatives for analysis of ecological count data' (Harrison et al. 2020 ).
How to cite:
Joshua Harrison (2020). CNVRG: Dirichlet Multinomial Modeling of Relative Abundance Data. R package version 1.0.0, https://cran.r-project.org/web/packages/CNVRG. Accessed 06 Nov. 2024.
Previous versions and publish date:
0.1 (2020-09-16 11:40), 0.2 (2020-11-21 16:10)
Other packages that cited CNVRG R package
View CNVRG citation profile
Other R packages that CNVRG depends, imports, suggests or enhances
Complete documentation for CNVRG
Functions, R codes and Examples using the CNVRG R package
Some associated functions: CNVRG-package . cnvrg_HMC . cnvrg_VI . diff_abund . diversity_calc . extract_pi_quantiles . extract_point_estimate . fungi . indexer . isd_transform . 
Some associated R codes: CNVRG-package.R . convrg_func.R . data.R . stanmodels.R .  Full CNVRG package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

maic  
Matching-Adjusted Indirect Comparison
A generalised workflow for generation of subject weights to be used in Matching-Adjusted Indirect C ...
Download / Learn more Package Citations See dependency  
seriation  
Infrastructure for Ordering Objects Using Seriation
Infrastructure for ordering objects with an implementation of several seriation/sequencing/ordinati ...
Download / Learn more Package Citations See dependency  
ddp  
Desirable Dietary Pattern
The desirable Dietary Pattern (DDP)/ PPH score measures the variety of food consumption. The (weigh ...
Download / Learn more Package Citations See dependency  
memoise  
'Memoisation' of Functions
Cache the results of a function so that when you call it again with the same arguments it returns t ...
Download / Learn more Package Citations See dependency  
equatiomatic  
Transform Models into 'LaTeX' Equations
The goal of equatiomatic is to reduce the painassociated with writing LaTeX formulas from fitted mod ...
Download / Learn more Package Citations See dependency  
mailR  
A Utility to Send Emails from R
Interface to Apache Commons Email to send emails from R. ...
Download / Learn more Package Citations See dependency  

23,092

R Packages

198,677

Dependencies

62,675

Author Associations

23,089

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA