Other packages > Find by keyword >

CMplot  

Circle Manhattan Plot
View on CRAN: Click here


Download and install CMplot package within the R console
Install from CRAN:
install.packages("CMplot")

Install from Github:
library("remotes")
install_github("cran/CMplot")

Install by package version:
library("remotes")
install_version("CMplot", "4.5.1")



Attach the package and use:
library("CMplot")
Maintained by
LiLin-Yin
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-05-26
Latest Update: 2024-01-19
Description:
Manhattan plot, a type of scatter plot, was widely used to display the association results. However, it is usually time-consuming and laborious for a non-specialist user to write scripts and adjust parameters of an elaborate plot. Moreover, the ever-growing traits measured have necessitated the integration of results from different Genome-wide association study researches. Circle Manhattan Plot is the first open R package that can lay out. Genome-wide association study P-value results in both traditional rectangular patterns, QQ-plot and novel circular ones. United in only one bull's eye style plot, association results from multiple traits can be compared interactively, thereby to reveal both similarities and differences between signals. Additional functions include: highlight signals, a group of SNPs, chromosome visualization and candidate genes around SNPs.
How to cite:
LiLin-Yin (2015). CMplot: Circle Manhattan Plot. R package version 4.5.1, https://cran.r-project.org/web/packages/CMplot. Accessed 16 Jul. 2026.
Previous versions and publish date:
1.0.1 (2015-05-26 09:38), 2.0.1 (2015-06-16 11:49), 3.0.1 (2015-08-28 16:36), 3.0.3 (2015-10-18 10:24), 3.1.3 (2016-06-02 13:39), 3.1.4 (2016-07-13 10:48), 3.2.0 (2017-03-20 06:22), 3.2.1 (2017-07-06 07:03), 3.3.0 (2017-12-14 14:04), 3.3.1 (2018-01-03 11:11), 3.3.3 (2018-12-06 07:40), 3.4.0 (2019-09-05 07:50), 3.5.1 (2019-12-10 12:30), 3.6.0 (2020-04-04 13:40), 3.6.2 (2020-06-30 07:50), 3.7.0 (2021-10-20 09:50), 4.0.0 (2022-01-13 10:42), 4.1.0 (2022-05-24 04:20), 4.2.0 (2022-10-12 12:32), 4.3.1 (2023-04-21 11:02), 4.4.1 (2023-08-18 06:02), 4.4.3 (2023-10-20 09:50), 4.5.0 (2023-11-27 10:20), (2026-07-09 07:59)
Other packages that cited CMplot R package
View CMplot citation profile
Other R packages that CMplot depends, imports, suggests or enhances
Complete documentation for CMplot
Functions, R codes and Examples using the CMplot R package
Some associated functions: CMplot-package . cattle50K . pig60K . 
Some associated R codes: zzz.R .  Full CMplot package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

tarchetypes  
Archetypes for Targets
Function-oriented Make-like declarative pipelines for Statistics and data science are supported in t ...
Download / Learn more Package Citations See dependency  
schoolmath  
Functions and Datasets for Math Used in School
Contains functions and datasets for math taught in school. A main focus is set to prime-calculation. ...
Download / Learn more Package Citations See dependency  
Rnmr1D  
Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra
Perform the complete processing of a set of proton nuclear magnetic resonance spectra from the free ...
Download / Learn more Package Citations See dependency  
wordnet  
WordNet Interface
An interface to WordNet using the Jawbone Java API to WordNet. WordNet (< ...
Download / Learn more Package Citations See dependency  
stevedata  
Steve's Toy Data for Teaching About a Variety of Methodological, Social, and Political Topics
This is a collection of various kinds of data with broad uses for teaching. My students, and academ ...
Download / Learn more Package Citations See dependency  
tibble  
Simple Data Frames
Provides a 'tbl_df' class (the 'tibble') with stricter checking and better formatting than the tradi ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA