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CHMM  

Coupled Hidden Markov Models
View on CRAN: Click here


Download and install CHMM package within the R console
Install from CRAN:
install.packages("CHMM")

Install from Github:
library("remotes")
install_github("cran/CHMM")

Install by package version:
library("remotes")
install_version("CHMM", "0.1.1")



Attach the package and use:
library("CHMM")
Maintained by
Julie Aubert
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-04-19
Latest Update: 2017-09-29
Description:
An exact and a variational inference for coupled Hidden Markov Models applied to the joint detection of copy number variations.
How to cite:
Julie Aubert (2017). CHMM: Coupled Hidden Markov Models. R package version 0.1.1, https://cran.r-project.org/web/packages/CHMM. Accessed 29 Oct. 2026.
Previous versions and publish date:
0.1.0 (2017-04-19 12:07), (2026-07-09 07:59)
Other packages that cited CHMM R package
View CHMM citation profile
Other R packages that CHMM depends, imports, suggests or enhances
Complete documentation for CHMM
Functions, R codes and Examples using the CHMM R package
Some associated functions: BackwardR . CHMM_EM . CHMM_VEM . Emis.Gauss . Emis.LRR . EmisGb.Gauss . ExpGrid . ForwardR . Wl . clusterseg . coupledHMM . init.EM . init.VEM . toydata . toystatus . viterbi_algo . 
Some associated R codes: CFunctions.R . CHMM.R . CHMM_EM.R . CHMM_VEM.R . FuncAux.R . FuncEmis.R . coupledHMM.R . data.R . init.EM.R . init.VEM.R . viterbi_algo.R .  Full CHMM package functions and examples
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