Other packages > Find by keyword >

CFAcoop  

Colony Formation Assay: Taking into Account Cellular Cooperation
View on CRAN: Click here


Download and install CFAcoop package within the R console
Install from CRAN:
install.packages("CFAcoop")

Install from Github:
library("remotes")
install_github("cran/CFAcoop")

Install by package version:
library("remotes")
install_version("CFAcoop", "1.0.0")



Attach the package and use:
library("CFAcoop")
Maintained by
Daniel Samaga
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-11-25
Latest Update: 2021-06-11
Description:
Cellular cooperation compromises the plating efficiency-based analysis of clonogenic survival data. This tool provides functions that enable a robust analysis of colony formation assay (CFA) data in presence or absence of cellular cooperation. The implemented method has been described in Brix et al. (2020). (Brix, N., Samaga, D., Hennel, R. et al. "The clonogenic assay: robustness of plating efficiency-based analysis is strongly compromised by cellular cooperation." Radiat Oncol 15, 248 (2020). ) Power regression for parameter estimation, calculation of survival fractions, uncertainty analysis and plotting functions are provided.
How to cite:
Daniel Samaga (2020). CFAcoop: Colony Formation Assay: Taking into Account Cellular Cooperation. R package version 1.0.0, https://cran.r-project.org/web/packages/CFAcoop. Accessed 06 Aug. 2026.
Previous versions and publish date:
0.1.0 (2020-11-25 10:30), (2026-07-09 07:59)
Other packages that cited CFAcoop R package
View CFAcoop citation profile
Other R packages that CFAcoop depends, imports, suggests or enhances
Complete documentation for CFAcoop
Functions, R codes and Examples using the CFAcoop R package
Some associated functions: CFAdata . analyze_survival . calculate_sf . export_sf . plot_sf . pwr_reg . 
Some associated R codes: CFAdata.R . analyze_survival.R . calculate_sf.R . export_sf.R . plot_sf.R . pwr_reg.R .  Full CFAcoop package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

SAMBA  
Selection and Misclassification Bias Adjustment for Logistic Regression Models
Health research using data from electronic health records (EHR) has gained popularity, but miscla ...
Download / Learn more Package Citations See dependency  
lsmeans  
Least-Squares Means
Obtain least-squares means for linear, generalized linear, and mixed models. Compute contrasts or l ...
Download / Learn more Package Citations See dependency  
TMDb  
Access to TMDb API
Provides an R-interface to the TMDb API (see TMDb API on < ...
Download / Learn more Package Citations See dependency  
RRedshiftSQL  
R Interface to the 'Redshift' Database
Superclasses 'PostgreSQL' connection to help enable full 'dplyr' functionality on 'Redshift'. ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  

28,083

R Packages

239,283

Dependencies

74,457

Author Associations

28,084

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA