R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
Bios2cor
View on CRAN: Click
here
Download and install Bios2cor package within the R console
Install from CRAN:
install.packages("Bios2cor")
Install from Github:
library("remotes")
install_github("cran/Bios2cor") Install by package version:
library("remotes")
install_version("Bios2cor", "2.2.2") Attach the package and use:
library("Bios2cor")
Maintained by
Marie Chabbert
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-08-24
Latest Update: 2024-11-14
Description:
Utilities for computation and analysis of correlation/covariation in multiple sequence alignments and in side chain motions during molecular dynamics simulations. Features include the computation of correlation/covariation scores using a variety of scoring functions between either sequence positions in alignments or side chain dihedral angles in molecular dynamics simulations and utilities to analyze the correlation/covariation matrix through a variety of tools including network representation and principal components analysis. In addition, several utility functions are based on the R graphical environment to provide friendly tools for help in data interpretation. Examples of sequence covariation analysis are provided in: (1) Pele J, Moreau M, Abdi H, Rodien P, Castel H, Chabbert M (2014) and (2) Taddese B, Deniaud M, Garnier A, Tiss A, Guissouma H, Abdi H, Henrion D, Chabbert M (2018) . An example of side chain correlated motion analysis is provided in: Taddese B, Garnier A, Abdi H, Henrion D, Chabbert M (2020) . This work was supported by the French National Research Agency (Grant number: ANR-11-BSV2-026) and by GENCI (Grant number: 100567).
How to cite:
Marie Chabbert (2017). Bios2cor: From Biological Sequences and Simulations to Correlation Analysis. R package version 2.2.2, https://cran.r-project.org/web/packages/Bios2cor. Accessed 07 Oct. 2026.
Previous versions and publish date:
Other packages that cited Bios2cor R package
View Bios2cor citation profile
Other R packages that Bios2cor depends,
imports, suggests or enhances
Complete documentation for Bios2cor
Functions, R codes and Examples using
the Bios2cor R package
Some associated functions: angle2rotamer . angles.plot . bios2cor-package . centered_pca . delta_filter . dynamic_circular . dynamic_entropy . dynamic_mi . dynamic_mip . dynamic_omes . dynamic_structure . elsc . entropy . import.fasta . import.msf . mcbasc . mi . mip . network.plot . omes . pca_2d . pca_screeplot . random.msa . scores.boxplot . scores_entropy.plot . top_pairs_analysis . write.entropy . write.pca . write.pca.pdb . write.scores . xyz2torsion .
Some associated R codes: angle2rotamer.R . angles.plot.R . centered_pca.R . delta_filter.R . dynamic_circular.R . dynamic_entropy.R . dynamic_mi.R . dynamic_mip.R . dynamic_omes.R . dynamic_structure.R . elsc.R . entropy.R . import.fasta.R . import.msf.R . mcbasc.R . mi.R . mip.R . network.plot.R . omes.R . pca_2d.R . pca_screeplot.R . random.msa.R . scores.boxplot.R . scores_entropy.plot.R . top_pairs_analysis.R . write.entropy.R . write.pca.R . write.pca.pdb.R . write.scores.R . xyz2torsion.R . Full Bios2cor package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
nextGenShinyApps
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
ggTimeSeries
Provides additional display mediums for time series visualisations. ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Aditya Kothari (view profile)
PairedData
Many datasets and a set of graphics (based on ggplot2), statistics, effect sizes and hypothesis test ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Stephane Champely (view profile)
skewlmm
It fits scale mixture of skew-normal linear mixed models using an expectation–maximization (EM) ty ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Fernanda L. Schumacher (view profile)
blandr
Carries out Bland Altman analyses (also known as a Tukey
mean-difference plot) as described by JM B ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Deepankar Datta (view profile)
splm
ML and GM estimation and diagnostic testing of econometric models for spatial panel data. ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Giovanni Millo (view profile)
28,905
R Packages
247,686
Dependencies
76,495
Author Associations
28,906
Publication Badges
