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Bioi
View on CRAN: Click
here
Download and install Bioi package within the R console
Install from CRAN:
install.packages("Bioi")
Install from Github:
library("remotes")
install_github("cran/Bioi") Install by package version:
library("remotes")
install_version("Bioi", "0.2.10") Attach the package and use:
library("Bioi")
Maintained by
Zachary Colburn
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-01-19
Latest Update: 2019-12-08
Description:
Single linkage clustering and connected component analyses are often performed on biological images. 'Bioi' provides a set of functions for performing these tasks. This functionality is implemented in several key functions that can extend to from 1 to many dimensions. The single linkage clustering method implemented here can be used on n-dimensional data sets, while connected component analyses are limited to 3 or fewer dimensions.
How to cite:
Zachary Colburn (2018). Bioi: Biological Image Analysis. R package version 0.2.10, https://cran.r-project.org/web/packages/Bioi. Accessed 07 Jun. 2026.
Other packages that cited Bioi R package
View Bioi citation profile
Other R packages that Bioi depends,
imports, suggests or enhances
Complete documentation for Bioi
Functions, R codes and Examples using
the Bioi R package
Some associated functions: Bioi . dot-euclidean_linker_cpp . dot-find_min_dists_cpp . dot-perform_grouping . dot-perform_partitioning . euclidean_linker . find_blobs . find_min_dists . identify_thresholded_objects .
Some associated R codes: Bioi.R . RcppExports.R . euclidean_linker.R . find_blobs.R . find_min_dists.R . perform_grouping.R . perform_partitioning.R . Full Bioi package functions and examples
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