Other packages > Find by keyword >

BioMark  

Find Biomarkers in Two-Class Discrimination Problems
View on CRAN: Click here


Download and install BioMark package within the R console
Install from CRAN:
install.packages("BioMark")

Install from Github:
library("remotes")
install_github("cran/BioMark")

Install by package version:
library("remotes")
install_version("BioMark", "0.4.5")



Attach the package and use:
library("BioMark")
Maintained by
Ron Wehrens
[Scholar Profile | Author Map]
First Published: 2011-02-08
Latest Update: 2015-09-07
Description:
Variable selection methods are provided for several classification methods: the lasso/elastic net, PCLDA, PLSDA, and several t-tests. Two approaches for selecting cutoffs can be used, one based on the stability of model coefficients under perturbation, and the other on higher criticism.
How to cite:
Ron Wehrens (2011). BioMark: Find Biomarkers in Two-Class Discrimination Problems. R package version 0.4.5, https://cran.r-project.org/web/packages/BioMark. Accessed 04 Apr. 2025.
Previous versions and publish date:
0.2.6 (2011-02-08 16:49), 0.3.0 (2011-07-06 21:10), 0.3.1 (2011-09-19 15:46), 0.3.2 (2011-10-20 17:34), 0.3.3 (2011-11-29 12:17), 0.4.0 (2012-07-10 15:54), 0.4.1 (2012-11-06 12:44), 0.4.2 (2014-08-06 07:29)
Other packages that cited BioMark R package
View BioMark citation profile
Other R packages that BioMark depends, imports, suggests or enhances
Complete documentation for BioMark
Functions, R codes and Examples using the BioMark R package
Some associated functions: HCthresh . ROC . SpikedApple . auxBiom . biom.options . gen.data . get.biom . get.segments . scalefun . selection . spikedApples . traceplot . 
Some associated R codes: biom.HC.R . biom.coef.R . biom.options.R . biom.stab.R . gen.data.R . get.biom.R . roc.R . scale.R . segments.R .  Full BioMark package functions and examples
Downloads during the last 30 days
03/0503/0603/0703/0803/0903/1003/1103/1203/1303/1403/1503/1603/1703/1803/1903/2003/2103/2203/2303/2403/2503/2603/2703/2803/2903/3003/3104/0104/02Downloads for BioMark2468101214161820222426TrendBars

Today's Hot Picks in Authors and Packages

metaprotr  
Metaproteomics Post-Processing Analysis
Set of tools for descriptive analysis of metaproteomics data generated from high-throughput mass ...
Download / Learn more Package Citations See dependency  
PakPMICS2014HH  
Multiple Indicator Cluster Survey (MICS) 2014 Household Questionnaire Data for Punjab, Pakistan
Provides data set and function for exploration of Multiple Indicator Cluster Survey (MICS) 2014 Hous ...
Download / Learn more Package Citations See dependency  
GeDS  
Geometrically Designed Spline Regression
Spline Regression, Generalized Additive Models, and Component-wise Gradient Boosting, utilizing Geo ...
Download / Learn more Package Citations See dependency  
RMixpanel  
API for Mixpanel
Provides an interface to many endpoints of Mixpanel's Data Export, Engage and JQL API. The R functio ...
Download / Learn more Package Citations See dependency  
perryExamples  
Examples for Integrating Prediction Error Estimation into Regression Models
Examples for integrating package 'perry' for prediction error estimation into regression models. ...
Download / Learn more Package Citations See dependency  
Rexperigen  
R Interface to Experigen
Provides convenience functions to communicate with an Experigen server: Experigen ( ...
Download / Learn more Package Citations See dependency  

23,990

R Packages

207,311

Dependencies

64,809

Author Associations

23,991

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA