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BinaryReplicates  

Dealing with Binary Replicates
View on CRAN: Click here


Download and install BinaryReplicates package within the R console
Install from CRAN:
install.packages("BinaryReplicates")

Install from Github:
library("remotes")
install_github("cran/BinaryReplicates")

Install by package version:
library("remotes")
install_version("BinaryReplicates", "1.0.0")



Attach the package and use:
library("BinaryReplicates")
Maintained by
Pierre Pudlo
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-01-23
Latest Update: 2026-01-23
Description:
Statistical methods for analyzing binary replicates, which are noisy binary measurements of latent binary states. Provides scoring functions (average, median, likelihood-based, and Bayesian) to estimate the probability that an individual is in the positive state. Includes maximum a posteriori estimation via the EM algorithm and full Bayesian inference via Stan. Supports classification with inconclusive decisions and prevalence estimation.
How to cite:
Pierre Pudlo (2026). BinaryReplicates: Dealing with Binary Replicates. R package version 1.0.0, https://cran.r-project.org/web/packages/BinaryReplicates. Accessed 26 Jun. 2026.
Previous versions and publish date:
No previous versions
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View BinaryReplicates citation profile
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Complete documentation for BinaryReplicates
Functions, R codes and Examples using the BinaryReplicates R package
Full BinaryReplicates package functions and examples
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