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BallMapper
View on CRAN: Click
here
Download and install BallMapper package within the R console
Install from CRAN:
install.packages("BallMapper")
Install from Github:
library("remotes")
install_github("cran/BallMapper")
Install by package version:
library("remotes")
install_version("BallMapper", "0.2.0")
Attach the package and use:
library("BallMapper")
Maintained by
Pawel Dlotko
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-07-26
Latest Update: 2019-08-20
Description:
The core algorithm is described in "Ball mapper: a shape summary for topological data analysis" by Pawel Dlotko, (2019) . Please consult the following youtube video the idea of functionality. Ball Mapper provide a topologically accurate summary of a data in a form of an abstract graph. To create it, please provide the coordinates of points (in the points array), values of a function of interest at those points (can be initialized randomly if you do not have it) and the value epsilon which is the radius of the ball in the Ball Mapper construction. It can be understood as the minimal resolution on which we use to create the model of the data.
How to cite:
Pawel Dlotko (2019). BallMapper: The Ball Mapper Algorithm. R package version 0.2.0, https://cran.r-project.org/web/packages/BallMapper. Accessed 22 Dec. 2024.
Previous versions and publish date:
0.1.0 (2019-07-26 13:10)
Other packages that cited BallMapper R package
View BallMapper citation profile
Other R packages that BallMapper depends,
imports, suggests or enhances
Complete documentation for BallMapper
Functions, R codes and Examples using
the BallMapper R package
Some associated functions: BallMapper . ColorIgraphPlot . GrayscaleIgraphPlot . colorByAllVariables . colorByAverageValueOfOtherVariable . colorByStDevValueOfOtherVariable . color_by_distance_to_reference_points . coloredDynamicNetwork . coordinates_of_points_in_subcollection . find_dominant_difference_using_averages . find_dominant_difference_using_averages_normalized_by_sd . normalize_to_average_0_stdev_1 . normalize_to_min_0_max_1 . pointToBallList . points_covered_by_landmarks . readBallMapperGraphFromFile . simpleDynamicNetwork . storeBallMapperGraphInFile .
Some associated R codes: BallMapper.R . run_test.R . test_BallMapper.R . Full BallMapper package functions and examples
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