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BacArena
View on CRAN: Click
here
Download and install BacArena package within the R console
Install from CRAN:
install.packages("BacArena")
Install from Github:
library("remotes")
install_github("cran/BacArena")
Install by package version:
library("remotes")
install_version("BacArena", "1.8.2")
Attach the package and use:
library("BacArena")
Maintained by
Johannes Zimmermann
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-01-06
Latest Update: 2022-11-20
Description:
Can be used for simulation of organisms living incommunities Bauer and Zimmermann 2017 doi10.1371journal.pcbi.1005544.Each organism is represented individually and genome scalemetabolic models determine the uptake and release of compounds. Biologicalprocesses such as movement diffusion chemotaxis and kinetics are availablealong with data analysis techniques.
How to cite:
Johannes Zimmermann (2016). BacArena: Modeling Framework for Cellular Communities in their
Environments. R package version 1.8.2, https://cran.r-project.org/web/packages/BacArena
Previous versions and publish date:
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