Other packages > Find by keyword >

BPM  

Bayesian Purity Model to Estimate Tumor Purity
View on CRAN: Click here


Download and install BPM package within the R console
Install from CRAN:
install.packages("BPM")

Install from Github:
library("remotes")
install_github("cran/BPM")

Install by package version:
library("remotes")
install_version("BPM", "1.0.0")



Attach the package and use:
library("BPM")
Maintained by
Jianzhao Gao and Xiaodan Fan
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-11-03
Latest Update: 2018-11-03
Description:
Bayesian purity model to estimate tumor purity using methylation array data (DNA methylation Infinium 450K array data) without reference samples.
How to cite:
Jianzhao Gao and Xiaodan Fan (2018). BPM: Bayesian Purity Model to Estimate Tumor Purity. R package version 1.0.0, https://cran.r-project.org/web/packages/BPM. Accessed 27 Jan. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited BPM R package
View BPM citation profile
Other R packages that BPM depends, imports, suggests or enhances
Complete documentation for BPM
Functions, R codes and Examples using the BPM R package
Some associated functions: ApiGetDMCs . BPM-package . BayPM . annotGeneNames . estimateNu . fullSampler . goodProbes . simUCEC . 
Some associated R codes: ApiGetDMCs.R . BPM-package.R . BayPM.R . annotGeneNames.R . estimateNu.R . fullSampler.R . goodProbes.R . simUCEC.R .  Full BPM package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
shinybrms  
Graphical User Interface ('shiny' App) for 'brms'
A graphical user interface (GUI) for fitting Bayesian regression models using the package 'brms' wh ...
Download / Learn more Package Citations See dependency  
AssetCorr  
Estimating Asset Correlations from Default Data
Functions for the estimation of intra- and inter-cohort correlations in the Vasicek credit portfolio ...
Download / Learn more Package Citations See dependency  
mgm  
Estimating Time-Varying k-Order Mixed Graphical Models
Estimation of k-Order time-varying Mixed Graphical Models and mixed VAR(p) models via elastic-net re ...
Download / Learn more Package Citations See dependency  
intccr  
Semiparametric Competing Risks Regression under Interval Censoring
Semiparametric regression models on the cumulative incidence function for interval-censored competin ...
Download / Learn more Package Citations See dependency  

23,580

R Packages

204,057

Dependencies

63,980

Author Associations

23,561

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA