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BPM  

Bayesian Purity Model to Estimate Tumor Purity
View on CRAN: Click here


Download and install BPM package within the R console
Install from CRAN:
install.packages("BPM")

Install from Github:
library("remotes")
install_github("cran/BPM")

Install by package version:
library("remotes")
install_version("BPM", "1.0.0")



Attach the package and use:
library("BPM")
Maintained by
Jianzhao Gao and Xiaodan Fan
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-11-03
Latest Update: 2018-11-03
Description:
Bayesian purity model to estimate tumor purity using methylation array data (DNA methylation Infinium 450K array data) without reference samples.
How to cite:
Jianzhao Gao and Xiaodan Fan (2018). BPM: Bayesian Purity Model to Estimate Tumor Purity. R package version 1.0.0, https://cran.r-project.org/web/packages/BPM. Accessed 22 Dec. 2024.
Previous versions and publish date:
No previous versions
Other packages that cited BPM R package
View BPM citation profile
Other R packages that BPM depends, imports, suggests or enhances
Complete documentation for BPM
Functions, R codes and Examples using the BPM R package
Some associated functions: ApiGetDMCs . BPM-package . BayPM . annotGeneNames . estimateNu . fullSampler . goodProbes . simUCEC . 
Some associated R codes: ApiGetDMCs.R . BPM-package.R . BayPM.R . annotGeneNames.R . estimateNu.R . fullSampler.R . goodProbes.R . simUCEC.R .  Full BPM package functions and examples
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