Other packages > Find by keyword >

BICORN  

Integrative Inference of De Novo Cis-Regulatory Modules
View on CRAN: Click here


Download and install BICORN package within the R console
Install from CRAN:
install.packages("BICORN")

Install from Github:
library("remotes")
install_github("cran/BICORN")

Install by package version:
library("remotes")
install_version("BICORN", "0.1.0")



Attach the package and use:
library("BICORN")
Maintained by
Xi Chen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-06-06
Latest Update: 2018-06-06
Description:
Prior transcription factor binding knowledge and target gene expression data are integrated in a Bayesian framework for functional cis-regulatory module inference. Using Gibbs sampling, we iteratively estimate transcription factor associations for each gene, regulation strength for each binding event and the hidden activity for each transcription factor.
How to cite:
Xi Chen (2018). BICORN: Integrative Inference of De Novo Cis-Regulatory Modules. R package version 0.1.0, https://cran.r-project.org/web/packages/BICORN. Accessed 06 Mar. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited BICORN R package
View BICORN citation profile
Other R packages that BICORN depends, imports, suggests or enhances
Complete documentation for BICORN
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

DatabionicSwarm  
Swarm Intelligence for Self-Organized Clustering
Algorithms implementing populations of agents that interact with one another and sense their environ ...
Download / Learn more Package Citations See dependency  
mlr3viz  
Visualizations for 'mlr3'
Visualization package of the 'mlr3' ecosystem. It features plots for mlr3 objects such as tasks, le ...
Download / Learn more Package Citations See dependency  
openxlsx  
Read, Write and Edit xlsx Files
Simplifies the creation of Excel .xlsx files by providing a high level interface to writing, stylin ...
Download / Learn more Package Citations See dependency  
EMVS  
The Expectation-Maximization Approach to Bayesian Variable Selection
An efficient expectation-maximization algorithm for fitting Bayesian spike-and-slab regularization p ...
Download / Learn more Package Citations See dependency  
solitude  
An Implementation of Isolation Forest
Isolation forest is anomaly detection method introduced by the paper Isolation based Anomaly Detecti ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  

26,264

R Packages

223,360

Dependencies

70,244

Author Associations

26,265

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA