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BEDMatrix  

Extract Genotypes from a PLINK .bed File
View on CRAN: Click here


Download and install BEDMatrix package within the R console
Install from CRAN:
install.packages("BEDMatrix")

Install from Github:
library("remotes")
install_github("cran/BEDMatrix")

Install by package version:
library("remotes")
install_version("BEDMatrix", "2.0.4")



Attach the package and use:
library("BEDMatrix")
Maintained by
Alexander Grueneberg
[Scholar Profile | Author Map]
First Published: 2015-11-06
Latest Update: 2020-07-08
Description:
A matrix-like data structure that allows for efficient, convenient, and scalable subsetting of binary genotype/phenotype files generated by PLINK (), the whole genome association analysis toolset, without loading the entire file into memory.
How to cite:
Alexander Grueneberg (2015). BEDMatrix: Extract Genotypes from a PLINK .bed File. R package version 2.0.4, https://cran.r-project.org/web/packages/BEDMatrix. Accessed 06 Apr. 2025.
Previous versions and publish date:
1.0.0 (2015-11-06 05:57), 1.0.1 (2015-11-12 08:44), 1.1.0 (2015-11-30 21:23), 1.2.0 (2016-03-05 00:15), 1.3.0 (2016-09-28 19:34), 1.4.0 (2017-05-07 15:33), 1.4.1 (2018-08-06 18:10), 1.5.0 (2019-04-25 17:00), 1.6.1 (2019-06-21 17:40), 2.0.1 (2019-12-16 21:10), 2.0.2 (2020-03-11 19:30), 2.0.3 (2020-07-08 08:20)
Other packages that cited BEDMatrix R package
View BEDMatrix citation profile
Other R packages that BEDMatrix depends, imports, suggests or enhances
Complete documentation for BEDMatrix
Functions, R codes and Examples using the BEDMatrix R package
Some associated functions: BEDMatrix-class . BEDMatrix-package . BEDMatrix . 
Some associated R codes: BEDMatrix.R .  Full BEDMatrix package functions and examples
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