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BDgraph

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Bayesian Structure Learning in Graphical Models using Birth-Death MCMC

View on CRAN: Click here

Download and install BDgraph package within the R console
Install from CRAN:

 install.packages("BDgraph")

Install from Github:

 library("remotes")

                        install_github("cran/BDgraph")

Install by package version:

 library("remotes")

                        install_version("BDgraph", "2.74")

Attach the package and use:

 library("BDgraph")

Maintained by
Reza Mohammadi
[Scholar Profile | Author Map]

All associated links for this package

First Published: 2012-09-26

Latest Update: 2024-08-23

Description:

Statistical tools for Bayesian structure learning in undirected graphical models for continuous, ordinal/discrete/count, and mixed data. The package is implemented the recent improvements in the Bayesian graphical models' literature, including Mohammadi and Wit (2015) , Mohammadi et al. (2021) , and Dobra and Mohammadi (2018) .

How to cite:

Reza Mohammadi (2012). BDgraph: Bayesian Structure Learning in Graphical Models using Birth-Death MCMC. R package version 2.74, https://cran.r-project.org/web/packages/BDgraph. Accessed 05 Jun. 2026.

Previous versions and publish date:

1.0 (2012-09-26 10:49), 1.1 (2012-10-08 19:24), 1.2 (2012-10-24 16:34), 2.0 (2013-02-05 11:29), 2.1 (2013-03-17 16:46), 2.2 (2013-03-24 15:11), 2.3 (2013-04-08 13:48), 2.4 (2013-04-22 08:05), 2.5 (2013-04-29 20:31), 2.6 (2013-05-06 21:32), 2.7 (2013-12-20 23:11), 2.8 (2014-05-29 15:11), 2.9 (2014-07-02 13:47), 2.10 (2014-07-11 09:31), 2.11 (2014-09-23 12:44), 2.12 (2014-09-24 14:23), 2.13 (2014-11-17 11:15), 2.14 (2014-12-19 07:26), 2.15 (2015-01-23 16:59), 2.16 (2015-02-28 01:16), 2.17 (2015-03-10 06:57), 2.18 (2015-04-19 07:45), 2.19 (2015-06-16 11:49), 2.20 (2015-08-21 18:04), 2.21 (2015-08-23 10:32), 2.22 (2015-08-31 19:31), 2.23 (2015-10-01 00:25), 2.24 (2015-11-18 18:34), 2.25 (2015-11-19 23:33), 2.26 (2015-12-21 15:29), 2.27 (2016-04-22 14:44), 2.28 (2016-10-03 09:43), 2.29 (2016-10-11 18:56), 2.30 (2016-11-15 07:16), 2.31 (2016-12-20 15:43), 2.32 (2017-01-09 21:45), 2.33 (2017-02-12 12:03), 2.34 (2017-04-14 16:57), 2.35 (2017-04-15 15:52), 2.36 (2017-04-29 00:30), 2.37 (2017-05-25 02:29), 2.38 (2017-06-21 01:36), 2.39 (2017-06-21 16:59), 2.40 (2017-08-14 17:11), 2.41 (2017-10-17 00:57), 2.42 (2017-11-06 17:10), 2.43 (2017-11-18 23:49), 2.44 (2018-01-05 14:33), 2.45 (2018-03-29 17:39), 2.46 (2018-04-17 16:25), 2.47 (2018-04-25 19:22), 2.48 (2018-05-04 13:05), 2.49 (2018-05-11 13:38), 2.50 (2018-05-20 13:52), 2.51 (2018-06-21 18:53), 2.52 (2018-10-04 00:03), 2.53 (2018-11-14 19:30), 2.54 (2019-01-21 14:10), 2.55 (2019-02-15 19:10), 2.56 (2019-03-20 00:53), 2.57 (2019-04-07 06:22), 2.58 (2019-04-15 17:25), 2.59 (2019-05-06 18:10), 2.60 (2019-08-08 06:40), 2.61 (2019-09-05 14:40), 2.62 (2019-12-05 19:40), 2.63 (2020-08-26 18:12), 2.64 (2021-05-03 06:50), 2.65 (2022-03-30 00:00), 2.66 (2022-04-14 17:12), 2.67 (2022-05-09 09:30), 2.68 (2022-08-08 20:40), 2.69 (2022-09-29 11:40), 2.70 (2022-10-13 13:42), 2.71 (2022-12-12 15:50), 2.72 (2022-12-25 08:20), 2.73 (2024-08-23 15:20)

Other packages that cited BDgraph R package

View BDgraph citation profile

Other R packages that BDgraph depends, imports, suggests or enhances

View BDgraph dependency map

Complete documentation for BDgraph

View documentation PDF

Functions, R codes and Examples using the BDgraph R package

Some associated functions: BDgraph-package . adj2link . auc . bdgraph.dw . bdgraph.mpl . bdgraph.npn . bdgraph . bdgraph.sim . bdw.reg . bf . compare . conf.mat . conf.mat.plot . covariance . ddweibull . geneExpression . gnorm . graph.sim . link2adj . pgraph . plinks . plot.bdgraph . plot.graph . plot.sim . plotcoda . plotroc . posterior.predict . precision . predict.bdgraph . print.bdgraph . print.sim . reinis . rgwish . rmvnorm . roc . rwish . select . sparsity . summary.bdgraph . surveyData . traceplot . trensfer .
Some associated R codes: adj2link.R . auc.R . bdgraph.R . bdgraph.dw.R . bdgraph.mpl.R . bdgraph.npn.R . bdgraph.sim.R . bdw.reg.R . bf.R . compare.R . conf.mat.R . conf.mat.plot.R . covariance.R . ddweibull.R . get_cores.R . get_things.R . gnorm.R . graph.sim.R . hill_climb_algorithm.R . hill_climb_binary.R . link2adj.R . pgraph.R . plinks.R . plotcoda.R . plotroc.R . posterior.predict.R . precision.R . rgwish.R . rmvnorm.R . roc.R . rwish.R . select.R . sparsity.R . traceplot.R . transfer.R . Full BDgraph package functions and examples

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