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AquaBPsim  

Aquaculture Breeding Program Simulation
View on CRAN: Click here


Download and install AquaBPsim package within the R console
Install from CRAN:
install.packages("AquaBPsim")

Install from Github:
library("remotes")
install_github("cran/AquaBPsim")

Install by package version:
library("remotes")
install_version("AquaBPsim", "0.0.1")



Attach the package and use:
library("AquaBPsim")
Maintained by
Chantal Roozeboom
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-03-01
Latest Update: 2023-04-02
Description:
Breeding programs can be simulated with this package. The functions are written to simulate production and reproduction systems encountered in aquaculture and are easy to combine with custom functions. Simulating breeding programs is useful to predict the expected genetic gain, rate of inbreeding and the effect of changes in the breeding program. AquaBPsim does not simulate genome wide-markers and QTLs, but it simulates estimated breeding values as values correlated to the true breeding values. The correlation equals the accuracy, which can be provided or calculated using deterministic formulas. For genomic selection, the accuracy can be calculate using the formula of Deatwyler et al. (2010) . Without genomic selection, accuracy can be calculated with the selection index method (Mrode, 2014. ISBN:978-1-84593-981-6).
How to cite:
Chantal Roozeboom (2022). AquaBPsim: Aquaculture Breeding Program Simulation. R package version 0.0.1, https://cran.r-project.org/web/packages/AquaBPsim. Accessed 28 Mar. 2025.
Previous versions and publish date:
0.0.1 (2022-03-01 09:40)
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