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Apoderoides  

Prioritize and Delete Erroneous Taxa in a Large Phylogenetic Tree
View on CRAN: Click here


Download and install Apoderoides package within the R console
Install from CRAN:
install.packages("Apoderoides")

Install from Github:
library("remotes")
install_github("cran/Apoderoides")

Install by package version:
library("remotes")
install_version("Apoderoides", "3.0.0")



Attach the package and use:
library("Apoderoides")
Maintained by
Satoshi Aoki
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-01-11
Latest Update: 2024-01-14
Description:
Finds, prioritizes and deletes erroneous taxa in a phylogenetic tree. This package calculates scores for taxa in a tree. Higher score means the taxon is more erroneous. If the score is zero for a taxon, the taxon is not erroneous. This package also can remove all erroneous taxa automatically by iterating score calculation and pruning taxa with the highest score.
How to cite:
Satoshi Aoki (2024). Apoderoides: Prioritize and Delete Erroneous Taxa in a Large Phylogenetic Tree. R package version 3.0.0, https://cran.r-project.org/web/packages/Apoderoides. Accessed 21 Nov. 2024.
Previous versions and publish date:
1.0.0 (2024-01-11 12:00), 1.0.1 (2024-01-14 16:20), 2.0.0 (2024-06-14 09:30), 2.0.1 (2024-06-19 09:30)
Other packages that cited Apoderoides R package
View Apoderoides citation profile
Other R packages that Apoderoides depends, imports, suggests or enhances
Complete documentation for Apoderoides
Functions, R codes and Examples using the Apoderoides R package
Some associated functions: Apoderoides-internal . autoDeletion . calc.Score . deleteAnomaly . get.upperRank . getAllCentroids . testRankList . testTree . 
Some associated R codes: Apoderoides.R . RcppExports.R .  Full Apoderoides package functions and examples
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