Other packages > Find by keyword >

AntMAN  

Anthology of Mixture Analysis Tools
View on CRAN: Click here


Download and install AntMAN package within the R console
Install from CRAN:
install.packages("AntMAN")

Install from Github:
library("remotes")
install_github("cran/AntMAN")

Install by package version:
library("remotes")
install_version("AntMAN", "1.1.0")



Attach the package and use:
library("AntMAN")
Maintained by
Bruno Bodin
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-10-28
Latest Update: 2021-07-23
Description:
Fits finite Bayesian mixture models with a random number of components. The MCMC algorithm implemented is based on point processes as proposed by Argiento and De Iorio (2019) and offers a more computationally efficient alternative to reversible jump. Different mixture kernels can be specified: univariate Gaussian, multivariate Gaussian, univariate Poisson, and multivariate Bernoulli (latent class analysis). For the parameters characterising the mixture kernel, we specify conjugate priors, with possibly user specified hyper-parameters. We allow for different choices for the prior on the number of components: shifted Poisson, negative binomial, and point masses (i.e. mixtures with fixed number of components).
How to cite:
Bruno Bodin (2019). AntMAN: Anthology of Mixture Analysis Tools. R package version 1.1.0, https://cran.r-project.org/web/packages/AntMAN. Accessed 26 Oct. 2026.
Previous versions and publish date:
1.0 (2019-10-28 16:20), 1.1.0 (2021-07-23 12:00), (2026-07-09 07:57)
Other packages that cited AntMAN R package
View AntMAN citation profile
Other R packages that AntMAN depends, imports, suggests or enhances
Complete documentation for AntMAN
Functions, R codes and Examples using the AntMAN R package
Some associated functions: AM_clustering . AM_coclustering . AM_demo_mvb_poi . AM_demo_mvn_poi . AM_demo_uvn_poi . AM_demo_uvp_poi . AM_emp_bayes_uninorm . AM_extract . AM_find_gamma_Delta . AM_find_gamma_NegBin . AM_find_gamma_Pois . AM_mcmc_configuration . AM_mcmc_fit . AM_mcmc_output . AM_mcmc_parameters . AM_mcmc_refit . AM_mix_components_prior . AM_mix_components_prior_dirac . AM_mix_components_prior_negbin . AM_mix_components_prior_pois . AM_mix_hyperparams . AM_mix_hyperparams_multiber . AM_mix_hyperparams_multinorm . AM_mix_hyperparams_uninorm . AM_mix_hyperparams_unipois . AM_mix_weights_prior . AM_mix_weights_prior_gamma . AM_plot_chaincor . AM_plot_density . AM_plot_mvb_cluster_frequency . AM_plot_pairs . AM_plot_pmf . AM_plot_similarity_matrix . AM_plot_traces . AM_plot_values . AM_prior . AM_prior_K_Delta . AM_prior_K_NegBin . AM_prior_K_Pois . AM_salso . AM_sample_multibin . AM_sample_multinorm . AM_sample_uninorm . AM_sample_unipois . AntMAN . IAM_VnkDelta . IAM_VnkNegBin . IAM_VnkPoisson . IAM_compute_stirling_ricor_abs . IAM_compute_stirling_ricor_log . IAM_mcmc_error . IAM_mcmc_neff . brain . carcinoma . galaxy . list_values . plot.AM_mcmc_output . plot.AM_prior . said . summary.AM_mcmc_configuration . summary.AM_mcmc_output . summary.AM_mix_components_prior . summary.AM_mix_hyperparams . summary.AM_mix_weights_prior . summary.AM_prior . 
Some associated R codes: AM_binder.R . AM_coclustering.R . AM_demo.R . AM_emp_bayes.R . AM_extract.R . AM_find_gamma.R . AM_mcmc.R . AM_mix_components_prior.R . AM_mix_hyperparams.R . AM_mix_weights_prior.R . AM_plot.R . AM_prior.R . AM_sample.R . AntMANDatasets.R . AntMANPackage.R . INTERNAL_functions_antman_uninorm.R . INTERNAL_utilities.R . RcppExports.R .  Full AntMAN package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
rts2  
Log-Gaussian Cox Process Models with Approximations
Supports modelling real-time case data to facilitate the real-time surveillance of infectious disea ...
Download / Learn more Package Citations See dependency  
MARSS  
Multivariate Autoregressive State-Space Modeling
The MARSS package provides maximum-likelihood parameter estimation for constrained and unconstraine ...
Download / Learn more Package Citations See dependency  
SADEG  
Stability Analysis in Differentially Expressed Genes
We analyzed the nucleotide composition of genes with a special emphasis on stability of DNA sequence ...
Download / Learn more Package Citations See dependency  
LSDsensitivity  
Sensitivity Analysis Tools for 'LSD' Simulations
Tools for sensitivity analysis of LSD simulation models. Reads object-oriented data produced by LSD ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,219

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA