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AiES  

Axon Integrity Evaluation System for Microscopy Images
View on CRAN: Click here


Download and install AiES package within the R console
Install from CRAN:
install.packages("AiES")

Install from Github:
library("remotes")
install_github("cran/AiES")

Install by package version:
library("remotes")
install_version("AiES", "0.99.6")



Attach the package and use:
library("AiES")
Maintained by
Shinji Tokunaga
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-06-06
Latest Update: 2025-06-06
Description:
Provides tools for the quantitative analysis of axon integrity in microscopy images. It implements image pre-processing, adaptive thresholding, feature extraction, and support vector machine-based classification to compute indices such as the Axon Integrity Index (AII) and Degeneration Index (DI). The package is designed for reproducible and automated analysis in neuroscience research.
How to cite:
Shinji Tokunaga (2025). AiES: Axon Integrity Evaluation System for Microscopy Images. R package version 0.99.6, https://cran.r-project.org/web/packages/AiES. Accessed 26 Aug. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited AiES R package
View AiES citation profile
Other R packages that AiES depends, imports, suggests or enhances
Complete documentation for AiES
Functions, R codes and Examples using the AiES R package
Full AiES package functions and examples
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