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ACDC
View on CRAN: Click
here
Download and install ACDC package within the R console
Install from CRAN:
install.packages("ACDC")
Install from Github:
library("remotes")
install_github("cran/ACDC") Install by package version:
library("remotes")
install_version("ACDC", "1.0.0") Attach the package and use:
library("ACDC")
Maintained by
Bjrn Tore Kopperud
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-01-12
Latest Update:
Description:
Features tools for exploring congruent phylogenetic birth-death models. It can construct the pulled speciation- and net-diversification rates from a reference model. Given alternative speciation- or extinction rates, it can construct new models that are congruent with the reference model. Functionality is included to sample new rate functions, and to visualize the distribution of one congruence class. See also Louca & Pennell (2020) .
How to cite:
Bjrn Tore Kopperud (2022). ACDC: Analysis of Congruent Diversification Classes. R package version 1.0.0, https://cran.r-project.org/web/packages/ACDC. Accessed 05 Aug. 2026.
Previous versions and publish date:
1.0.0 (2022-01-12 21:02), (2026-07-09 07:56)
Other packages that cited ACDC R package
View ACDC citation profile
Other R packages that ACDC depends,
imports, suggests or enhances
Functions, R codes and Examples using
the ACDC R package
Some associated functions: ACDC-package . congruent.models . create.model . get.gmrf.global.scale . get.hsmrf.global.scale . model2df . plot.ACDC . plot.ACDCset . primates . primates_ebd . primates_ebd_log . primates_ebd_tess . primates_ebd_treepar . print.ACDC . print.ACDCposterior . print.ACDCset . print.ACDCsets . read.RevBayes . sample.basic.models . sample.congruence.class . sample.congruence.class.posterior . sample.rates . summarize.posterior . summarize.trends .
Some associated R codes: ACDC.R . compute.extinction.R . compute.speciation.R . congruent.models.R . create.model.R . data.R . globals.R . plot.ACDC.R . plot.ACDCset.R . print.ACDCsets.R . pulled.diversification.R . pulled.speciation.R . read.RevBayes.R . sample.congruence.class.R . sample.congruence.class.posterior.R . sample.rates.R . summarize.posterior.R . summarize.trends.R . utils.R . Full ACDC package functions and examples
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